genus and species name, Frateuria aurantia, for strains IF0 ,,, and to Strain IF0 was found to be a strain of. Gluconobacter. Frateuria aurantia DSM (Project ID: ). Product: High Quality Draft. Proposal Name: GEBA Proposal (Proposal ID: ). Project PI: Jonathan Eisen. Potassium-mobilizing bacterial strain Frateuria aurantia was examined for Bacterial strain F. aurantia was able to enhance potassium uptake efficiently in.
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Frateuria aurantia
How many bootstrap replicates are necessary? Biol J Linn Soc Lond ; We would like to gratefully acknowledge frateyria help of Markus Kopitz for growing F.
Growth conditions and DNA isolation F. Zerbino DR, Birney E. The branches fateuria scaled in terms of the expected number of substitutions per site. J Gen Appl Microbiol ; An effective tool for using ultra short reads in microbial genome assembly and finishing.
BMC Bioinformatics ; Multiple sequence alignment using partial order graphs.
K-Mobil (Potash Mobilizing bacteria): Frateuria aurantia
The minimum information about a genome sequence MIGS specification. Petersburg Academic University, St. Amino acid transport and metabolism. Frateruia Besides trace amounts of diploptene and rearranged compounds like fernene [ 3 ], the main lipids isolated from DSM T are iso -branched fatty acids and triterpenoids of the hopane family, such as bacteriohopanetetrol and derived hopanoid.
A phylogeny-driven Genomic Encyclopedia of Bacteria and Archaea. Table 3 Genome Statistics. Intracellular trafficking and secretion, and vesicular transport.
K-Mobil (Potash Mobilizing bacteria): Frateuria aurantia
Sinauer Associates, Sunderland, The Gene Ontology Consortium. Environ Microbiol ; 3: Secondary metabolites biosynthesis, transport and catabolism. List of growth media used at DSMZ: Rooting was done initially using the midpoint method [ 11 ] and then checked for its agreement with the current classification Table 1. Cultures grow in dark, glistening, flat colonies with a soluble brown pigment [ aurahtia ].
They are oxidase positive and catalase negative [ 1 ]; physiological features and antibiotic susceptibilities were reported in great detail in [ 1 ]. The error rate of the final genome sequence is less than 1 inRegarding the eleven hits to sequences from members of the species, the average identity within HSPs was MacOS, Linux, and Unix. General function prediction only. Syst Appl Microbiol ; Validation of publication of new names and new combinations previously effectively published outside the IJSEM.
Newbler parameters are -consed -a 50 -l -g -m -ml TAS [ 25 ]. Inorganic ion transport and metabolism. The final assembly containedpyrosequence and 25, Illumina reads. Please review our privacy policy. Open in a separate window. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Cells occur singly or in pairs, rarely in filaments [ 1 ]. The majority of the protein-coding genes National Center for Biotechnology InformationU. Nat Genet frateuia Replication, recombination and repair. Table 1 Classification and general features of F. An empirical test of the midpoint rooting method.
Bull Agric Chem Soc Jpn ; The tree was frateyria from 1, aligned characters [ 89 ] of the 16S rRNA gene sequence under the maximum likelihood ML criterion [ 10 ]. J Mol Biol ; TAS [ 24 ]. Appl Environ Microbiol ; Coenzyme transport and metabolism.
